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1.
Sci Rep ; 14(1): 10557, 2024 05 08.
Artículo en Inglés | MEDLINE | ID: mdl-38719889

RESUMEN

Cardiometabolic multimorbidity (CM), defined as the coexistence of two or three cardiometabolic disorders, is one of the most common and deleterious multimorbidities. This study aimed to investigate the association of Clínica Universidad de Navarra-Body Adiposity Estimator (CUN-BAE), body mass index (BMI), waist circumference (WC), and waist-to-height ratio (WHtR) with the prevalence of CM. The data were obtained from the 2021 health checkup database for residents of the Electronic Health Management Center in Xinzheng, Henan Province, China. 81,532 participants aged ≥ 60 years were included in this study. Logistic regression models were used to estimate the odd ratios (ORs) and 95% confidence intervals (CIs) for CUN-BAE, BMI, WC, and WHtR in CM. The area under the receiver operating characteristic curve (AUC) was used to compare the discriminatory ability of different anthropometric indicators for CM. The multivariable-adjusted ORs (95% CIs) (per 1 SD increase) of CM were 1.799 (1.710-1.893) for CUN-BAE, 1.329 (1.295-1.364) for BMI, 1.343 (1.308-1.378) for WC, and 1.314 (1.280-1.349) for WHtR, respectively. Compared with BMI, WC and WHtR, CUN-BAE had the highest AUC in both males and females (AUC: 0.642; 95% CI 0.630-0.653 for males, AUC: 0.614; 95% CI 0.630-0.653 for females). CUN-BAE may be a better measure of the adverse effect of adiposity on the prevalence of CM than BMI, WC, and WHtR.


Asunto(s)
Adiposidad , Índice de Masa Corporal , Multimorbilidad , Obesidad , Circunferencia de la Cintura , Humanos , Masculino , Femenino , Persona de Mediana Edad , Estudios Transversales , Obesidad/epidemiología , Anciano , China/epidemiología , Relación Cintura-Estatura , Prevalencia , Enfermedades Cardiovasculares/epidemiología , Enfermedades Cardiovasculares/etiología , Curva ROC
2.
Theor Appl Genet ; 137(1): 28, 2024 Jan 22.
Artículo en Inglés | MEDLINE | ID: mdl-38252297

RESUMEN

KEY MESSAGE: We developed an array of Zea-Tripsacum tri-hybrid allopolyploids with multiple ploidies. We unveiled that changes in genome dosage due to the chromosomes pyramiding and shuffling of three species effects karyotypic heterogeneity, reproductive diversity, and phenotypic variation in Zea-Tripsacum allopolyploids. Polyploidy, or whole genome duplication, has played a major role in evolution and speciation. The genomic consequences of polyploidy have been extensively studied in many plants; however, the extent of chromosomal variation, genome dosage, phenotypic diversity, and heterosis in allopolyploids derived from multiple species remains largely unknown. To address this question, we synthesized an allohexaploid involving Zea mays, Tripsacum dactyloides, and Z. perennis by chromosomal pyramiding. Subsequently, an allooctoploid and an allopentaploid were obtained by hybridization of the allohexaploid with Z. perennis. Moreover, we constructed three populations with different ploidy by chromosomal shuffling (allopentaploid × Z. perennis, allohexaploid × Z. perennis, and allooctoploid × Z. perennis). We have observed 3 types of sexual reproductive modes and 2 types of asexual reproduction modes in the tri-species hybrids, including 2n gamete fusion (2n + n), haploid gamete fusion (n + n), polyspermy fertilization (n + n + n) or 2n gamete fusion (n + 2n), haploid gametophyte apomixis, and asexual reproduction. The tri-hybrids library presents extremely rich karyotype heterogeneity. Chromosomal compensation appears to exist between maize and Z. perennis. A rise in the ploidy of the trihybrids was linked to a higher frequency of chromosomal translocation. Variation in the degree of phenotypic diversity observed in different segregating populations suggested that genome dosage effects phenotypic manifestation. These findings not only broaden our understanding of the mechanisms of polyploid formation and reproductive diversity but also provide a novel insight into genome pyramiding and shuffling driven genome dosage effects and phenotypic diversity.


Asunto(s)
Poaceae , Zea mays , Zea mays/genética , Cariotipo , Haploidia , Poliploidía , Variación Biológica Poblacional
3.
Hortic Res ; 11(1): uhad238, 2024 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-38222823

RESUMEN

As two of the most abundant post-translational modifications, phosphorylation and ubiquitination play a significant role in modulating plant-pathogen interactions and increasing evidence indicates their crosstalk in plant immunity. Rose (Rosa sp.) is one of the most important ornamental plants and can be seriously infected by Botrytis cinerea. Here, integrated proteomics analysis was performed to detect global proteome, phosphorylation, and ubiquitination changes in rose upon B. cinerea infection and investigate the possible phosphorylation and ubiquitination crosstalk. A total of 6165 proteins, 11 774 phosphorylation and 10 582 ubiquitination sites, and 77 phosphorylation and 13 ubiquitination motifs were identified. Botrytis cinerea infection resulted in 169 up-regulated and 122 down-regulated proteins, 291 up-regulated and 404 down-regulated phosphorylation sites, and 250 up-regulated and 634 down-regulated ubiquitination sites. There were 12 up-regulated PR10 proteins and half of them also showed reduced ubiquitination. A lot of kinases probably involved in plant pattern-triggered immunity signaling were up-regulated phosphoproteins. Noticeably, numerous kinases and ubiquitination-related proteins also showed a significant change in ubiquitination and phosphorylation, respectively. A cross-comparison of phosphoproteome and ubiquitylome indicated that both of two post-translational modifications of 104 proteins were dynamically regulated, and many putative pattern-triggered immunity signaling components in the plant plasma membrane were co-regulated. Moreover, five selected proteins, including four PR10 proteins and a plasma membrane aquaporin, were proven to be involved in rose resistance to B. cinerea. Our study provides insights into the molecular mechanisms underlying rose resistance to B. cinerea and also increases the database of phosphorylation and ubiquitination sites in plants.

4.
J Fungi (Basel) ; 9(7)2023 Jul 07.
Artículo en Inglés | MEDLINE | ID: mdl-37504723

RESUMEN

Cysteine-rich secretory proteins (C), antigen 5 (A), and pathogenesis-related 1 proteins (P) comprise widespread CAP superfamily proteins, which have been proven to be novel virulence factors of mammalian pathogenic fungi and some plant pathogens. Despite this, the identification and function of CAP proteins in more species of plant pathogens still need to be studied. This work presents the identification and functional analysis of CAP superfamily proteins from Puccinia striiformis f. sp. tritici (Pst), an important fungal pathogen that causes wheat stripe rust on wheat worldwide. A total of six CAP genes were identified in the Pst genome, designated as PsCAP1-PsCAP6. Five PsCAP proteins, including PsCAP1, PsCAP2, PsCAP3, PsCAP4, and PsCAP5, have N-terminal signal peptides secreted with the yeast signal sequence trap assay. Single-nucleotide polymorphism (SNP) analysis indicated that they showed a low level of intraspecies polymorphism. The expression abundance of PsCAP genes at different Pst infection stages was detected by RT-qPCR, and most of them were highly expressed during Pst infection on wheat and also Pst sexual reproduction on barberry (Berberis shensiana). Noticeably, the silencing of these six PsCAP genes by BSMV-mediated HIGS indicated that PsCAP1, PsCAP4, and PsCAP5 contribute significantly to Pst infection in wheat. These results indicate that PsCAP proteins may act as virulence factors during Pst infection, which also provides insights into Pst pathogenicity.

5.
New Phytol ; 239(3): 949-963, 2023 08.
Artículo en Inglés | MEDLINE | ID: mdl-37247338

RESUMEN

Ascorbic acid (AsA) is a water-soluble antioxidant that plays important roles in plant development and human health. Understanding the regulatory mechanism underlying AsA biosynthesis is imperative to the development of high AsA plants. In this study, we reveal that the auxin response factor SlARF4 transcriptionally inhibits SlMYB99, which subsequently modulates AsA accumulation via transcriptional activation of AsA biosynthesis genes GPP, GLDH, and DHAR. The auxin-dependent transcriptional cascade of SlARF4-SlMYB99-GPP/GLDH/DHAR modulates AsA synthesis, while mitogen-activated protein kinase SlMAPK8 not only phosphorylates SlMYB99, but also activates its transcriptional activity. Both SlMYB99 and SlMYB11 proteins physically interact with each other, thereby synergistically regulating AsA biosynthesis by upregulating the expression of GPP, GLDH, and DHAR genes. Collectively, these results demonstrate that auxin and abscisic acid antagonistically regulate AsA biosynthesis during development and drought tolerance in tomato via the SlMAPK8-SlARF4-SlMYB99/11 module. These findings provide new insights into the mechanism underlying phytohormone regulation of AsA biosynthesis and provide a theoretical basis for the future development of high AsA plants via molecular breeding.


Asunto(s)
Ácido Abscísico , Solanum lycopersicum , Humanos , Solanum lycopersicum/genética , Ácidos Indolacéticos , Ácido Ascórbico , Antioxidantes/metabolismo , Regulación de la Expresión Génica de las Plantas
7.
Int J Mol Sci ; 23(19)2022 Oct 09.
Artículo en Inglés | MEDLINE | ID: mdl-36233304

RESUMEN

There is an array of pathogenic fungi in the natural environment of plants, which produce some molecules including pathogen-associated molecular patterns (PAMPs) and effectors during infection. These molecules, which can be recognized by plant specific receptors to activate plant immunity, including PTI (PAMP-triggered immunity) and ETI (effector-triggered immunity), are called elicitors. Undoubtedly, identification of novel fungal elicitors and their plant receptors and comprehensive understanding about fungal elicitor-triggered plant immunity will be of great significance to effectively control plant diseases. Great progress has occurred in fungal elicitor-triggered plant immunity, especially in the signaling pathways of PTI and ETI, in recent years. Here, recent advances in fungal elicitor-triggered plant immunity are summarized and their important contribution to the enlightenment of plant disease control is also discussed.


Asunto(s)
Moléculas de Patrón Molecular Asociado a Patógenos , Inmunidad de la Planta , Hongos/metabolismo , Moléculas de Patrón Molecular Asociado a Patógenos/metabolismo , Enfermedades de las Plantas/microbiología , Plantas/metabolismo
8.
Sensors (Basel) ; 22(15)2022 Jul 25.
Artículo en Inglés | MEDLINE | ID: mdl-35898049

RESUMEN

The proportion of pet keeping has increased significantly. According to the survey results of Business Next, the proportion of Taiwan families keeping pets was 70% in 2020. Among them, the total number of fish pets was close to 33% of the overall pet proportion. Therefore, aquarium pets have become indispensable companions for families. At present, many studies have discussed intelligent aquarium systems. Through image recognition based on visual sensors, we may be able to detect and interpret the physiological status of the fish according to their physiological appearance. In this way, it can help to notify the owner as soon as possible to treat the fish or isolate them individually, so as to avoid the spread of infection. However, most aquarium pets are kept in groups. Traditional image recognition technologies often fail to recognize each fish's physiological states precisely because of fish swimming behaviors, such as grouping swimming, shading with each other, flipping over, and so on. In view of this, this paper tries to address such problems and then proposes a practical scheme, which includes three phases. Specifically, the first phase tries to enhance the image recognition model for small features based on the prioritizing rules, thus improving the instant recognition capability. Then, the second phase exploits a designed fish-ID tracking mechanism and analyzes the physiological state of the same fish-ID through coherent frames, which can avoid temporal misidentification. Finally, the third phase leverages a fish-ID correction mechanism, which can detect and correct their IDs periodically and dynamically to avoid tracking confusion, and thus potentially improve the recognition accuracy. According to the experiment results, it was verified that our scheme has better recognition performance. The best accuracy and correctness ratio can reach up to 94.9% and 92.67%, which are improved at least 8.41% and 26.95%, respectively, as compared with the existing schemes.


Asunto(s)
Peces , Natación , Animales , Natación/fisiología , Taiwán
9.
Hu Li Za Zhi ; 69(3): 102-108, 2022 Jun.
Artículo en Chino | MEDLINE | ID: mdl-35644603

RESUMEN

This nursing experience describes the application of "self-efficacy theory" to a patient with low self-efficacy who was diagnosed with advanced esophageal cancer. The nursing period was from December 3rd, 2020 to December 23rd, 2020. Medical records, interview assessment, and observation showed that the patient had ineffective airway clearance, which caused him to be in and out of the hospital several times, resulting in lower self-efficacy. In addition to applying the "self-efficacy theory", the authors referenced the patient's physiological and affective states, vicarious experiences, and performance experiences and used verbal persuasion techniques to assess the patient for nursing and interventions. During the nursing period, we established a good therapeutic relationship with the patient. We provided him with personalized nursing interventions to improve his physiological and affective states. These interventions included the administration of medication, posture drainage, and sputum percussion. We also sought the help of people who were close to the patient as participants in the medical care process. We improved self-efficacy by means of verbal persuasion through education and mental support; increased vicarious experience through verbal encouragement and sharing the experiences of other patients; and used a comparative approach to enable the patient to observe changes in his physical status over time. The interventions also improved his performance experience. The patient's airway status improved after his self-efficacy had been enhanced. Based on the results, it is hoped that this study will be a helpful reference on the theory of self-efficacy for nursing staff. It is also hoped that the results will better enable nurses to enhance the self-efficacy of patients using different means such as restoring patient confidence and enhancing the patient - the medical team relationship to further enhance the quality of patient care.


Asunto(s)
Neoplasias Esofágicas , Autoeficacia , Humanos , Masculino
10.
Materials (Basel) ; 15(4)2022 Feb 21.
Artículo en Inglés | MEDLINE | ID: mdl-35208161

RESUMEN

In this paper, the effect of temperature on the corrosion behavior and corrosion resistance of the copper-aluminum laminated composite plates were investigated by salt-spray corrosion, potential polarization curve and electrochemical impedance spectroscopy. Moreover, the microstructure of the copper-aluminum laminated composite plate after salt-spray corrosion was observed by scanning electron microscope, and X-ray photoelectron spectroscopy was used to study the composition of corrosion product. The results revealed that the corrosion products of the copper-aluminum laminated composite plate were Al2O3 and AlOOH. Due to the galvanic corrosion of the copper-aluminum laminated composite plate, the cathode underwent oxygen absorption corrosion during the corrosion process; therefore, the presence of moisture and the amount of dissolved oxygen in the corrosive environment had a great influence on the corrosion process. The increasing temperature would evaporate a large amount of moisture, resulting in the corrosion product-aluminum oxide dehydrated and covered the surface of the material in the process of salt-spray corrosion, which played a role in protecting the material. Therefore, the corrosion resistance of the copper-aluminum laminated composite plate first decreased and then increased. In the salt-spray corrosion environment, the corrosion resistance of the copper-aluminum laminated composite plate reached the lowest at 45 °C, and its corrosion rate was the fastest, at 0.728 g/m2·h. The electrochemical corrosion occurred in the solution, and the impact was small; however, in addition to the protective corrosion products, the ion mobility in the solution also had a certain influence on the corrosion rate, and the ionic activity increased with the increase of temperature. Therefore, the corrosion resistance of the copper-aluminum laminated composite plate gradually decreased as the temperature increased, and its corrosion resistance was the worst at 50 °C.

11.
J Heart Lung Transplant ; 41(1): 95-103, 2022 01.
Artículo en Inglés | MEDLINE | ID: mdl-34666942

RESUMEN

BACKGROUND: The United States National Organ Procurement Transplant Network (OPTN) implemented changes to the adult heart allocation system to reduce waitlist mortality by improving access for those at greater risk of pre-transplant death, including patients on short-term mechanical circulatory support (sMCS). While sMCS increased, it is unknown whether the increase occurred equitably across centers. METHODS: The OPTN database was used to assess changes in use of sMCS at time of transplant in the 12 months before (pre-change) and after (post-change) implementation of the allocation system in October 2018 among 5,477 heart transplant recipients. An interrupted time series analysis comparing use of bridging therapies pre- and post-change was performed. Variability in the proportion of sMCS use at the center level pre- and post-change was determined. RESULTS: In the month pre-change, 9.7% of patients were transplanted with sMCS. There was an immediate increase in sMCS transplant the following month to 32.4% - an absolute and relative increase of 22.7% and 312% (p < 0.001). While sMCS use was stable pre-change (monthly change 0.0%, 95% CI [-0.1%,0.1%]), there was a continuous 1.2%/month increase post-change ([0.6%,1.8%], p < 0.001). Center-level variation in sMCS use increased substantially after implementation, from a median (interquartile range) of 3.85% (10%) pre-change to 35.7% (30.6%) post-change (p < 0.001). CONCLUSIONS: Use of sMCS at time of transplant increased immediately and continued to expand following heart allocation policy changes. Center-level variation in use of sMCS at the time of transplant increased compared to pre-change, which may have negatively impacted equitable access to heart transplantation.


Asunto(s)
Equidad en Salud , Política de Salud , Trasplante de Corazón , Corazón Auxiliar , Obtención de Tejidos y Órganos/estadística & datos numéricos , Obtención de Tejidos y Órganos/normas , Adulto , Anciano , Femenino , Humanos , Masculino , Persona de Mediana Edad , Estudios Retrospectivos , Factores de Tiempo , Estados Unidos
12.
Phys Chem Chem Phys ; 24(3): 1580-1589, 2022 Jan 19.
Artículo en Inglés | MEDLINE | ID: mdl-34942640

RESUMEN

The near-infrared light (NIR) absorption of nitrogen-doped graphene quantum dots (NGQDs) containing different N-doping sites is systematically investigated with density functional theory (DFT) and time-dependent density functional theory (TD-DFT) calculations with Perdew-Burke-Ernzerhof (PBE) functionals. The results show that the ultra-small HOMO-LUMO gaps (0.3-1.0 eV) of various N-doping structures (graphitic, amino, and pyridinic at center, and graphitic at edge) are attributed to the spin-polarization of the energy states, which effectively enhances the NIR absorption for NGQDs. Overall, the graphitic N-doping structure exhibits the best NIR absorption. Moreover, the electron attraction effect of the different N-sites is found to be crucial for the LUMO level, where stronger electron attraction lowers the LUMO energy. This work provides critical insight in further design of NGQDs for NIR absorption.

13.
Plant Physiol ; 187(4): 2530-2543, 2021 12 04.
Artículo en Inglés | MEDLINE | ID: mdl-34890460

RESUMEN

Several effectors from phytopathogens usually target various cell organelles to interfere with plant defenses, and they generally contain sequences that direct their translocation into organelles, such as chloroplasts. In this study, we characterized a different mechanism for effectors to attack chloroplasts in wheat (Triticum aestivum). Two effectors from Puccinia striiformis f. sp. tritici (Pst), Pst_4, and Pst_5, inhibit Bax-mediated cell death and plant immune responses, such as callose deposition and reactive oxygen species (ROS) accumulation. Gene silencing of the two effectors induced significant resistance to Pst, demonstrating that both effectors function as virulence factors of Pst. Although these two effectors have low sequence similarities and lack chloroplast transit peptides, they both interact with TaISP (wheat cytochrome b6-f complex iron-sulfur subunit, a chloroplast protein encoded by nuclear gene) in the cytoplasm. Silencing of TaISP impaired wheat resistance to avirulent Pst and resulted in less accumulation of ROS. Heterogeneous expression of TaISP enhanced chloroplast-derived ROS accumulation in Nicotiana benthamiana. Co-localization in N. benthamiana and western blot assay of TaISP content in wheat chloroplasts show that both effectors suppressed TaISP from entering chloroplasts. We conclude that these biotrophic fungal effectors suppress plant defenses by disrupting the sorting of chloroplast protein, thereby limiting host ROS accumulation and promoting fungal pathogenicity.


Asunto(s)
Basidiomycota/fisiología , Cloroplastos/metabolismo , Enfermedades de las Plantas/microbiología , Inmunidad de la Planta , Proteínas de Plantas/metabolismo , Triticum/inmunología , Transporte Biológico , Resistencia a la Enfermedad , Triticum/microbiología
14.
Planta ; 255(1): 22, 2021 Dec 16.
Artículo en Inglés | MEDLINE | ID: mdl-34918180

RESUMEN

MAIN CONCLUSION: Numerous transcription factor genes and methylation-related genes were differentially expressed in senescent petals compared with control petals. Studying petal senescence is crucial for extending the postharvest longevity of cut flowers, but petal senescence remains relatively unexplored compared to well-studied leaf senescence. In this study, a combined transcriptomic and proteomic analysis of senescent (22 days after cutting) and control (0 day after cutting) petals was performed to investigate the molecular processes underlying petal senescence of chrysanthemum (Chrysanthemum morifolium Ramat.), an important cut flower crop worldwide. A total of 11,324 differentially expressed genes (DEGs), including 4888 up-regulated and 6436 down-regulated genes, and 403 differentially expressed proteins (DEPs), including 210 up-regulated and 193 down-regulated proteins, were identified at transcript and protein levels, respectively. A cross-comparison of transcriptomic and proteomic data identified 257 consistent DEGs/DEPs, including 122 up-regulated and 135 down-regulated DEGs/DEPs. Kyoto encyclopedia of genes and genomes (KEGG) enrichment analysis showed that "cutin, suberine and wax biosynthesis" is a main pathway for both DEGs and DEPs, especially for down-regulated DEGs/DEPs. Functional analysis indicated that chrysanthemum genes mainly encoding putative cytochrome P450s, non-specific lipid-transfer proteins, subtilisin-like proteases, AAA-ATPases, proteins essential for cuticular wax biosynthesis, and proteins in hormone signal transduction or ubiquitination were differentially expressed at both transcript and protein levels. In addition, numerous transcription factor genes and methylation-related genes were also differentially expressed, inferring an involvement of transcriptional and epigenetic regulation in petal senescence. These results provide a valuable resource of studying chrysanthemum senescence and significant insights into petal senescence.


Asunto(s)
Chrysanthemum , Chrysanthemum/genética , Epigénesis Genética , Senescencia de la Planta , Proteómica , Transcriptoma/genética
15.
Front Plant Sci ; 12: 730620, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34630478

RESUMEN

Botrytis elliptica, the causal agent of gray mold disease, poses a major threat to commercial Lilium production, limiting its ornamental value and yield. The molecular and metabolic regulation mechanisms of Lilium's defense response to B. elliptica infection have not been completely elucidated. Here, we performed transcriptomic and metabolomic analyses of B. elliptica resistant Lilium oriental hybrid "Sorbonne" to understand the molecular basis of gray mold disease resistance in gray mold disease. A total of 115 differentially accumulated metabolites (DAMs) were detected by comparing the different temporal stages of pathogen infection. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis showed the differentially expressed genes (DEGs) and DAMs were enriched in the phenylpropanoid and flavonoid pathways at all stages of infection, demonstrating the prominence of these pathways in the defense response of "Sorbonne" to B. elliptica. Network analysis revealed high interconnectivity of the induced defense response. Furthermore, time-course analysis of the transcriptome and a weighted gene coexpression network analysis (WGCNA) led to the identification of a number of hub genes at different stages, revealing that jasmonic acid (JA), salicylic acid (SA), brassinolide (BR), and calcium ions (Ca2+) play a crucial role in the response of "Sorbonne" to fungal infection. Our work provides a comprehensive perspective on the defense response of Lilium to B. elliptica infection, along with a potential transcriptional regulatory network underlying the defense response, thereby offering gene candidates for resistance breeding and metabolic engineering of Lilium.

16.
iScience ; 24(7): 102794, 2021 Jul 23.
Artículo en Inglés | MEDLINE | ID: mdl-34355143

RESUMEN

There are plenty publications providing guidance for resistant taxa selection by experimental researches while the number of experimental taxa is often restricted. In this study, we presented a concise method to predict the temperature tolerance of wild Lilium in China based on open access botanical and associated environmental datasets. We divided all taxa into five groups to present an overview of Lilium's adaptability to temperature stress. Furthermore, according to the environmental conditions, the prediction of heat and cold tolerance in Lilium was made based on the combined multi-sources data at taxon level. Thirteen taxa with potential temperature tolerance were predicted of 42 taxa. The results showed that not only is tolerance prediction created by large-scale data analysis possible, but that it may supplement traditional laboratory researches with a comprehensive list of taxa.

17.
Int J Mol Sci ; 22(16)2021 Aug 18.
Artículo en Inglés | MEDLINE | ID: mdl-34445624

RESUMEN

SBP-box is an important plant-specific transcription factor family and is involved in diverse biological processes. Here, we identified a total of 15 SBP-BOX genes in the important fruit crop sweet orange (Citrus sinensis) and characterized their gene structures, conserved domain and motif, chromosomal location, and cis-acting regulatory elements. SBP genes were classified into four subfamilies based on the amino acid sequence homology, and the classification is equally strongly supported by the gene and protein structures. Our analysis revealed that segmental duplication events were the main driving force in the evolution of CsSBP genes, and gene pairs might undergo extensive purifying selection. Further synteny analysis of the SBP members among sweet orange and other plant species provides valuable information for clarifying the CsSBP family evolutionary relationship. According to publicly available RNA-seq data and qRT-PCR analysis from various sweet orange tissues, CsSBP genes may be expressed in different tissues and developmental stages. Gene expression analysis showed variable expression profiles of CsSBP genes under various abiotic stresses, such as high and low-temperature, salt, and wound treatments, demonstrating the potential role of SBP members in sweet orange response to abiotic stress. Noticeably, all CsSBP genes were also downregulated in sweet orange upon the infection of an important fungal pathogen Diaporthe citri. Our results provide valuable information for exploring the role of SBP-Box in sweet orange.


Asunto(s)
Citrus sinensis/metabolismo , Regulación de la Expresión Génica de las Plantas , Genoma de Planta , Familia de Multigenes , Proteínas de Plantas/metabolismo , Factores de Transcripción/metabolismo , Citrus sinensis/genética , Citrus sinensis/crecimiento & desarrollo , Perfilación de la Expresión Génica , Filogenia , Proteínas de Plantas/genética , Secuencias Reguladoras de Ácidos Nucleicos , Factores de Transcripción/genética
18.
Theor Appl Genet ; 134(9): 2727-2747, 2021 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-34076729

RESUMEN

Genome editing, a revolutionary technology in molecular biology and represented by the CRISPR/Cas9 system, has become widely used in plants for characterizing gene function and crop improvement. Tomato, serving as an excellent model plant for fruit biology research and making a substantial nutritional contribution to the human diet, is one of the most important applied plants for genome editing. Using CRISPR/Cas9-mediated targeted mutagenesis, the re-evaluation of tomato genes essential for fruit ripening highlights that several aspects of fruit ripening should be reconsidered. Genome editing has also been applied in tomato breeding for improving fruit yield and quality, increasing stress resistance, accelerating the domestication of wild tomato, and recently customizing tomato cultivars for urban agriculture. In addition, genome editing is continuously innovating, and several new genome editing systems such as the recent prime editing, a breakthrough in precise genome editing, have recently been applied in plants. In this review, these advances in application of genome editing in tomato and recent development of genome editing technology are summarized, and their leaving important enlightenment to plant research and precision plant breeding is also discussed.


Asunto(s)
Sistemas CRISPR-Cas , Productos Agrícolas/genética , Edición Génica , Genes de Plantas , Genoma de Planta , Sitios de Carácter Cuantitativo , Solanum lycopersicum/genética , Productos Agrícolas/crecimiento & desarrollo , Solanum lycopersicum/crecimiento & desarrollo
19.
Plant Sci ; 304: 110804, 2021 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-33568303

RESUMEN

Adverse environmental conditions such as drought stress greatly limit the growth and production of crops worldwide. In this study, SlGRAS4, a drought stress-responsive GRAS gene from tomato (Solanum lycopersicum) was functionally characterized. Repressing SlGRAS4 (SlGRAS4-RNAi) increased sensitivity to drought stress, whereas overexpressing SlGRAS4 (SlGRAS4-OE) in tomato enhanced tolerance of this stress. Under stress condition SlGRAS4-OE plants accumulated much less ROS than wild-type and SlGRAS4-RNAi plants. Numerous dehydration induced ROS-scavenging genes were upregulated in SlGRAS4-OE plants after drought stress, implying that SlGRAS4 confers drought tolerance by modulating ROS homeostasis. On the other hand, there are several abscisic acid (ABA)-responsive elements in SlGRAS4 promoter, the relative expression of ABA signaling genes including SlPYLs, SlPP2Cs and SlSnRK2s were verified in WT and transgenic plants both under normal and drought stress, the changed drought sensitivity of transgenic plants was mainly caused by SlSnRK2s, the positive regulators of ABA signaling. Our results suggested that SlGRAS4 directly binds to and activates SlSnRK2.4 promoter, belongs to subclass III SnRK2s, which play crucial role in ABA signaling. Protein studies revealed that SlSnRK2.4 interacts with SlAREB1 and SlAREB2, the major downstream transcription factors of ABA-dependent signaling pathway. SlGRAS4 therefore confers drought tolerance may be through SnRK2-AREB pathway.


Asunto(s)
Ácido Abscísico/metabolismo , Genes de Plantas/fisiología , Reguladores del Crecimiento de las Plantas/metabolismo , Proteínas de Plantas/fisiología , Transducción de Señal , Solanum lycopersicum/genética , Deshidratación , Germinación , Solanum lycopersicum/metabolismo , Solanum lycopersicum/fisiología , Reacción en Cadena de la Polimerasa , Regiones Promotoras Genéticas , Especies Reactivas de Oxígeno/metabolismo , Plantones/crecimiento & desarrollo , Transducción de Señal/fisiología , Transcriptoma , Técnicas del Sistema de Dos Híbridos
20.
RSC Adv ; 11(30): 18500-18508, 2021 May 19.
Artículo en Inglés | MEDLINE | ID: mdl-35480943

RESUMEN

It was recently discovered that the oxygen evolution reaction (OER) and hydrogen evolution reaction (HER) can be completed on the {110} and {001} facets, respectively, of a 18-facet SrTiO3 mono-crystal. The effective charge separation is attributed to the facet junction at the interface between two arbitrary anisotropic crystal planes. Theoretical estimation of the built-in potential at the facet junction can greatly improve understanding of the mechanism. This work employs density functional theory (DFT) calculations to investigate such potential at the (110)/(100) facet junction in SrTiO3 crystals. The formation of the facet junction is verified by a calculated work function difference between the (110) and (100) planes, which form p-type and n-type segments of the junction, respectively. The built-in potential is estimated at about 2.9 V. As a result, with the ultra high built-in potential, electrons and holes can effectively transfer to different anisotropic planes to complete both photo-oxidative and photo-reductive reactions.

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